ICFO (Barcelona, Spain)
The Institute of Photonic Sciences
ICFO aims to advance the very limits of knowledge in Photonics, namely the science and technology of harnessing Light for fundamental physics, chemistry, material science, and applications in biological and medical research. The Attoscience and Ultrafast Optics research infrastructure provides world-leading capabilities such as cutting edge few-cycle and carrier-to-envelope phase-stable mid-IR sources for extremem nonlinear optics, attosecond soft X-ray core level spectroscopy with cryogenic capabilities, or high harmonic spectroscopy. The SLN lab is equipped with cutting edge microscopy techniques and performs continuous development to provide unique features. The research programs cover a wide range of applications, from super resolution to mesoscopic levels. We collaborate with industry, hospitals and research centres. Our systems are available to all type of end-users. We provide training that can be accommodated to users.
Website: www.icfo.eu
Contact: Núria Charles-Harris

Research highlights
Attoscience and Ultrafast Optics
Investigation of the attosecond Quantum to reveal the dynamic behaviour of the quantum world within atoms molecules and solids that lead to macroscopic functionalities. We use attosecond soft x-ray pulses and quantum microscopy with single electrons to address fundamental problems such as molecular isomerization, phase transitions and superconductivity with applications across quantum sensing, energy harvesting and storage, efficient sensing and computing. [Nature Phot. 15, 277-280 (2021), Nature Comm. 12, 1520 (2021), Phys. Rev. X. 11, 041060 (2021), Ultrafast Science 3, 4, (2023), Nature 628, 746 (2024), Nature Photon. 18, 731-737 (2024), PRX Quantum, 5, 040319 (2024)].
Cellular and Molecular Biology
Optimizing new molecular tools for high resolution detection of cellular events regulated by ubiquitin family members. In LSFM, images are generated through a plane-based strategy in which only a single slice of the sample is excited per exposure time, and the emitted photons are collected perpendicularly, forming an image. In our implementation in which the sample can be imaged either as in any classical configuration, as it flows through the light-sheet using a fluidic approach, or a combination of both. We also evaluate its ability to image a variety of samples, from zebrafish embryos and larvae to 3D complex cell cultures [Sci. Rep. 12, 1969 (2022)].
SLN Facility
At the Superresolution Light microscopy and Nanoscopy (SLN) facility, we analyse network functional alterations after a focal lesion in neuronal tissue by combining laser microsurgery and calcium fluorescence imaging. We show that the network actively participate in recovery, restoring the initial network activity. Our approach offers new insights for modelling network functional loss and recovery with applications that go from stroke to degenerative disorders. [eNeuro 7, 1-13 (2020)]
A major challenge is the generation of reproducible neural networks together with the ability to interrogate and record at the single cell level. In this study, we report on the use of 2PP scaffolds with tailored topographies as an effective method of producing defined in vitro human neural networks for application in influencing neurite guidance and complex network activity. [Lab on a Chip 20, 1792-1806 (2020)]
Expertise
ICFO
Attoscience, laser research, nonlinear optics, extreme photonics, x-ray spectroscopy, electron diffraction, material research, 2D and quantum materials, microscopy, biological and medical research.
Attoscience and Ultrafast Optics
The aim of our research is the development of tools and establishment of methodologies for investigation of the ultrafast events that are caused by electrons inside atoms, molecules, solids and biological matter. The power of attoscience and ultrafast optics lies in the incredible time resolution that gives access to observing the triggering events that are caused by electronic rearrangement and ultimately lead, at hugely varying temporal scales, to molecular dissociation, chemical reactions, excitonic energy transfer or even biological function. Our research is diverse and includes pioneering development of new sources of high power and intense few-cycle pulses and frequency combs at long wavelengths up to the long wave infrared regime. These sources are key enablers for coherent soft-X-ray generation across the water window (300-500 eV) and attosecond emission below the atomic unit of time (24 as). These sources enable element selective and time resolved measurements, lensless imaging as well as using electron recollision to image bond distances in molecules.
SLN
We conduct research and development at the cutting-edge of several microscopy and super resolution imaging techniques. We combine different technologies to make them compatible in a multimodal imaging fashion. Research activities include beam engineering, wavefront control and integration of novel light sources with different beam or pulse parameters. We study novel (endogenous and exogenous) contrast agents to be applied to a wide variety of biomedical samples and imaging regimes. We also design novel algorithms for image quantification and analysis. Finally, our research involves optical manipulation tools such as Optical Tweezers and Femtosecond nanosurgery.
Services for industry
Lasers
Amplification, pulse compression: Expertise on the desig of laser amplification and compresison. OPCPA or nonlinear pulse compression.
Materials
Material diagnostics and functionality: Expertise in measuring the opto-electronic response on ultrafast time scales. Manipulation of carrier-lattive dynamics.
Nonlinear optics and x-rays
Secondary source design: Expertise in coherent x-ray generation.
Biology/Medicine
Microscopy and metrology: Expertise in the domain of microscopy, different methods such as FLIM, light-sheet etc.
Equipment offered to external users
ICFO
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- Attoscience facility
- UV to mid-IR laser sources
- Attosecond SXR beamline for core-level spectroscopy
- Strong field HHG in solids and spectroscopy
- Etching: ICP, RIE and wNanofabrication lab
- Lithography: electron-beam and optical lithography
- Focused Ion Beam: Ga/e– and He/Ne dual-beam tools
- Etching: ICP, RIE and wet etching
- Thin film deposition: thermal and electron-beam evaporation, sputtering, atomic layer deposition
- Surface preparation: plasma asher, UVO cleaner, ovens
- Characterization: SEM, EDX, atomic force microscopy, spectroscopic ellipsometry, profilometry, microscopy, etc.
- Specific controlled environment: glove boxes, fume hoods, laminar flows, etc.
- Super-resolution Light Microscopy & Nanoscopy Facility
- Advanced Engineering Lab
- Biology Lab
- Molecular Biology: Molecular cloning. Gene expression. PCR. Electrophoresis. Genome editing using CRSPR/Cas9 technology.
- Biochemistry: Protein purification. PAGE. Western blot.
- Mammalian cells: Routine cell culture and sample preparation. Transient transfection. Generation of stably transfected cell lines.
- Immunoassays: Antibody conjugation. Immunosfluorescence. Immunoprecipitation.
- Microorganisms: Routine culture. Maintenance and update of a bacterial strain collection. Plasmid propagation and purification.
- Culture of wild type and different mutants of invertebrate model organism Caenorhabditis elegans.
- Biological sample handling and preparation for STORM and other super resolution microscopy techniques.
- Attoscience facility
SLN
- A STED microscope, 3 colour, 3D, gated.
- STED CW microscope, operating also as a multiphoton (TPEF, SHG).
- A multimodal confocal microscope operating also as a multiphoton (TPEF, SHG, PSHG, THG). The system can be coupled to different ultrashort pulsed lasers working at the central wavelength of 800-900nm, 960nm, 1040-1060nm, 1500nm.
- A custom made multiphoton microscope system (TPEF, SHG, PSHG, THG).
- Custom made Light Sheet Microscopes (3):
- high throughput combined with fluidics, multiview.
- Fast volumetric imaging, with different resolutions (low and high NA), using electrically tunabe lenses or wavefront coding
- Ultramicroscope for clarified samples
- A Raman microscope and expertise in statistical analysis of biological samples.
- A custom made Adaptive Optics based Scanning Laser Ophthalmoscope with retinal tracker

A 2dpf zebrafish larvae is imaged using a LSFM setup developed at ICFO, at the Super-resolution Light microscopy and Nanoscopy (SLN) facility with a double illumination scheme. (Scale bar 100 um)